Birney, Ewan : rechercher sur Z-Library

Vamathevan, Jessica, Apweiler, Rolf, Birney, Ewan

Année:

2013

Langue:

english

Fichier:

PDF, 1.19 MB

english, 2013

Biomolecular Data Resources: Bioinformatics Infrastructure for Biomedical Data Science

Journal:

Annual Review of Biomedical Data Science

Année:

2019

Langue:

english

Fichier:

PDF, 1.02 MB

english, 2019

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

Birney, Ewan, Stamatoyannopoulos, John A., Dutta, Anindya, Guigó, Roderic, Gingeras, Thomas R., Margulies, Elliott H., Weng, Zhiping, Snyder, Michael, Dermitzakis, Emmanouil T., Stamatoyannopoulos, Jo

Journal:

Flicek, Paul, Birney, Ewan

Année:

2007

Langue:

english

Fichier:

PDF, 4.47 MB

english, 2007

Sense from sequence reads: methods for alignment and assembly

Journal:

Flicek, Paul, Birney, Ewan

Année:

2009

Langue:

english

Fichier:

PDF, 663 KB

english, 2009

Sense from sequence reads: methods for alignment and assembly

Journal:

Margulies, Elliott H., Birney, Ewan

Année:

2010

Langue:

english

Fichier:

PDF, 100 KB

english, 2010

Approaches to comparative sequence analysis: towards a functional view of vertebrate genomes

Journal:

Nature Reviews Genetics

Année:

2008

Langue:

english

Fichier:

PDF, 620 KB

english, 2008

PH domain: the first anniversary

Gibson, Toby J., Hyvönen, Marko, Musacchio, Andrea, Saraste, Matti, Birney, Ewan

Journal:

Trends in Biochemical Sciences

Année:

1994

Langue:

english

Fichier:

PDF, 638 KB

english, 1994

Promoter shape varies across populations and affects promoter evolution and expression noise

Schor, Ignacio E, Degner, Jacob F, Harnett, Dermot, Cannavò, Enrico, Casale, Francesco P, Shim, Heejung, Garfield, David A, Birney, Ewan, Stephens, Matthew, Stegle, Oliver, Furlong, Eileen E M

Journal:

Kerstin Lindblad-Toh, Eric S. Lander, John D. McPherson, Robert H. Waterston, Jane Rodgers, Ewan Birney

Année:

2017

Langue:

english

Fichier:

PDF, 1.64 MB

english, 2017

The European Bioinformatics Institute in 2017: data coordination and integration

Cook, Charles E, Bergman, Mary T, Cochrane, Guy, Apweiler, Rolf, Birney, Ewan

Journal:

Nucleic Acids Research

Année:

2018

Langue:

english

Fichier:

PDF, 1.79 MB

english, 2018

Progress in sequencing the mouse genome

Journal:

genesis

Année:

2001

Langue:

english

Fichier:

PDF, 131 KB

english, 2001

The International Protein Index: An integrated database for proteomics experiments

Paul J. Kersey, Jorge Duarte, Allyson Williams, Youla Karavidopoulou, Ewan Birney, Rolf Apweiler

Journal:

PROTEOMICS

Année:

2004

Langue:

english

Fichier:

PDF, 39 KB

english, 2004

10.1038/35002770

Hubbard, Tim, Birney, Ewan

Journal:

Futreal, P. Andrew, Kasprzyk, Arek, Birney, Ewan, Mullikin, James C., Wooster, Richard, Stratton, Michael R.

Année:

2000

Langue:

english

Fichier:

PDF, 65 KB

english, 2000

Cancer and genomics

Journal:

Birney, Ewan, Bateman, Alex, Clamp, Michele E., Hubbard, Tim J.

Année:

2001

Langue:

english

Fichier:

PDF, 108 KB

english, 2001

Mining the draft human genome

Journal:

Année:

2001

Langue:

english

Fichier:

PDF, 86 KB

english, 2001

Unrestricted free access works and must continue

Salzberg, Steven, Birney, Ewan, Eddy, Sean, White, Owen

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 83 KB

english, 2003

Evolutionary genomics: Come fly with us

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 240 KB

english, 2007

Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

Hillier, LaDeana W., Miller, Webb, Birney, Ewan, Warren, Wesley, Hardison, Ross C., Ponting, Chris P., Bork, Peer, Burt, David W., Groenen, Martien A. M., Delany, Mary E.

Journal:

Warren, Wesley C., Hillier, LaDeana W., Marshall Graves, Jennifer A., Birney, Ewan, Ponting, Chris P., Grützner, Frank, Belov, Katherine, Miller, Webb, Clarke, Laura, Chinwalla, Asif T.

Année:

2004

Langue:

english

Fichier:

PDF, 1.37 MB

english, 2004

Genome analysis of the platypus reveals unique signatures of evolution

Journal:

Warren, Wesley C., Hillier, LaDeana W., Marshall Graves, Jennifer A., Birney, Ewan, Ponting, Chris P., Grützner, Frank, Belov, Katherine, Miller, Webb, Clarke, Laura, Chinwalla, Asif T.

Année:

2008

Langue:

english

Fichier:

PDF, 530 KB

english, 2008

Genome analysis of the platypus reveals unique signatures of evolution

Journal:

Année:

2008

Langue:

english

Fichier:

PDF, 66 KB

english, 2008

SNP and haplotype mapping for genetic analysis in the rat

Saar, Kathrin, Beck, Alfred, Bihoreau, Marie-Thérèse, Birney, Ewan, Brocklebank, Denise, Chen, Yuan, Cuppen, Edwin, Demonchy, Stephanie, Dopazo, Joaquin, Flicek, Paul

Journal:

Année:

2008

Langue:

english

Fichier:

PDF, 332 KB

english, 2008

Double Dutch for duplications

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 221 KB

english, 2007

Challenges and standards in integrating surveys of structural variation

Scherer, Stephen W, Lee, Charles, Birney, Ewan, Altshuler, David M, Eichler, Evan E, Carter, Nigel P, Hurles, Matthew E, Feuk, Lars

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 406 KB

english, 2007

Assemblies: the good, the bad, the ugly

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 99 KB

english, 2011

Levers and fulcrums: progress in cis-regulatory motif models

Journal:

Ettwiller, Laurence, Paten, Benedict, Ramialison, Mirana, Birney, Ewan, Wittbrodt, Joachim

Année:

2008

Langue:

english

Fichier:

PDF, 235 KB

english, 2008

Trawler: de novo regulatory motif discovery pipeline for chromatin immunoprecipitation

Journal:

Durinck, Steffen, Spellman, Paul T, Birney, Ewan, Huber, Wolfgang

Année:

2007

Langue:

english

Fichier:

PDF, 285 KB

english, 2007

Mapping identifiers for the integration of genomic datasets with the R/Bioconductor package biomaRt

Journal:

Nature Protocols

Année:

2009

Langue:

english

Fichier:

PDF, 532 KB

english, 2009

Comparative genomics: genome-wide analysis in metazoan eukaryotes

Ureta-Vidal, Abel, Ettwiller, Laurence, Birney, Ewan

Journal:

Nature Reviews Genetics

Année:

2003

Langue:

english

Fichier:

PDF, 463 KB

english, 2003

ENFIN—a Network to Enhance Integrative Systems Biology

PASCAL KAHLEM, EWAN BIRNEY

Journal:

Annals of the New York Academy of Sciences

Année:

2007

Langue:

english

Fichier:

PDF, 127 KB

english, 2007

Paralogous annotation of disease-causing variants in long QT syndrome genes

James S. Ware, Roddy Walsh, Fiona Cunningham, Ewan Birney, Stuart A. Cook

Journal:

Human Mutation

Année:

2012

Langue:

english

Fichier:

PDF, 182 KB

english, 2012

The Anopheles gambiae genome: an update

Emmanuel Mongin, Christos Louis, Robert A. Holt, Ewan Birney, Frank H. Collins

Journal:

Trends in Parasitology

Année:

2004

Langue:

english

Fichier:

PDF, 118 KB

english, 2004

Genome information resources – developments at Ensembl

Martin P. Hammond, Ewan Birney

Journal:

Trends in Genetics

Année:

2004

Langue:

english

Fichier:

PDF, 501 KB

english, 2004

Chromatin and heritability: how epigenetic studies can complement genetic approaches

Ewan Birney

Journal:

Trends in Genetics

Année:

2011

Langue:

english

Fichier:

PDF, 198 KB

english, 2011

Genome annotation techniques: new approaches and challenges

Alistair G. Rust, Emmanuel Mongin, Ewan Birney

Journal:

Drug Discovery Today

Année:

2002

Langue:

english

Fichier:

PDF, 247 KB

english, 2002

A database and API for variation, dense genotyping and resequencing data

Daniel Rios, William M McLaren, Yuan Chen, Ewan Birney, Arne Stabenau, Paul Flicek, Fiona Cunningham

Journal:

Guy St C Slater, Ewan Birney

Année:

2010

Langue:

english

Fichier:

PDF, 1012 KB

english, 2010

Automated generation of heuristics for biological sequence comparison

Journal:

Année:

2005

Langue:

english

Fichier:

PDF, 318 KB

english, 2005

Optimising oligonucleotide array design for ChIP-on-chip

Fiona Nielsen, Stefan Graef, Xinmin Zhang, Stefan Kurtz, Sergei Denissov, Roland Green, Ewan Birney, Paul Flicek, Martijn Huynen, Henk Stunnenberg

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 134 KB

english, 2007

Integrating biological data – the Distributed Annotation System

Andrew M Jenkinson, Mario Albrecht, Ewan Birney, Hagen Blankenburg, Thomas Down, Robert D Finn, Henning Hermjakob, Tim JP Hubbard, Rafael C Jimenez, Philip Jones, Andreas Kähäri, Eugene Kulesha, José

Journal:

Xianjun Dong, Melissa C Greven, Anshul Kundaje, Sarah Djebali, James B Brown, Chao Cheng, Tom R Gingeras, Mark Gerstein, Roderic Guigó, Ewan Birney, Zhiping Weng

Année:

2008

Langue:

english

Fichier:

PDF, 257 KB

english, 2008

Ensembl variation resources

Yuan Chen, Fiona Cunningham, Daniel Rios, William M McLaren, James Smith, Bethan Pritchard, Giulietta M Spudich, Simon Brent, Eugene Kulesha, Pablo Marin-Garcia, Damian Smedley, Ewan Birney, Paul Flic

Journal:

BMC Genomics

Année:

2010

Langue:

english

Fichier:

PDF, 4.20 MB

english, 2010

Modeling gene expression using chromatin features in various cellular contexts

Journal:

Alison Meynert, Ewan Birney

Année:

2012

Langue:

english

Fichier:

PDF, 988 KB

english, 2012

Picking Pyknons out of the Human Genome

Journal:

Cell

Année:

2006

Langue:

english

Fichier:

PDF, 131 KB

english, 2006

A Transcription Factor Collective Defines Cardiac Cell Fate and Reflects Lineage History

Guillaume Junion, Mikhail Spivakov, Charles Girardot, Martina Braun, E. Hilary Gustafson, Ewan Birney, Eileen E.M. Furlong

Journal:

Cell

Année:

2012

Langue:

english

Fichier:

PDF, 2.13 MB

english, 2012

ENFIN – A European network for integrative systems biology

Pascal Kahlem, Andrew Clegg, Florian Reisinger, Ioannis Xenarios, Henning Hermjakob, Christine Orengo, Ewan Birney

Journal:

Comptes Rendus Biologies

Année:

2009

Langue:

english

Fichier:

PDF, 973 KB

english, 2009

The consequence of natural selection on genetic variation in the mouse

Eli Reuveni, Ewan Birney, Cornelius T. Gross

Journal:

Genomics

Année:

2010

Langue:

english

Fichier:

PDF, 527 KB

english, 2010

Analysis of variation at transcription factor binding sites inDrosophilaand humans

Mikhail Spivakov, Junaid Akhtar, Pouya Kheradpour, Kathryn Beal, Charles Girardot, Gautier Koscielny, Javier Herrero, Manolis Kellis, Eileen EM Furlong, Ewan Birney

Journal:

Kevin Y Yip, Chao Cheng, Nitin Bhardwaj, James B Brown, Jing Leng, Anshul Kundaje, Joel Rozowsky, Ewan Birney, Peter Bickel, Michael Snyder, Mark Gerstein

Année:

2012

Langue:

english

Fichier:

PDF, 1.17 MB

english, 2012

Classification of human genomic regions based on experimentally determined binding sites of more than 100 transcription-related factors

Journal:

Guy Cochrane, Charles E Cook, Ewan Birney

Année:

2012

Langue:

english

Fichier:

PDF, 1.45 MB

english, 2012

The future of DNA sequence archiving

Journal:

GigaScience

Année:

2012

Langue:

english

Fichier:

PDF, 168 KB

english, 2012

The making of ENCODE: Lessons for big-data projects

Journal:

Albert J Vilella, Ewan Birney, Paul Flicek, Javier Herrero

Année:

2012

Langue:

english

Fichier:

PDF, 768 KB

english, 2012

Considerations for the inclusion of 2x mammalian genomes in phylogenetic analyses

Journal:

Julian Parkhill, Ewan Birney, Paul Kersey

Année:

2011

Langue:

english

Fichier:

PDF, 847 KB

english, 2011

Genomic information infrastructure after the deluge

Journal: